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The 4th i2b2 European Academic User Group meeting

September 15th, 2016  2.30 PM - September 16th 12.30 PM 

Piazza del Collegio Borromeo, 9,27100 Pavia PV - Italy

 

Agenda and Materials

The program included presentations on projects using i2b2/tranSMART and related platforms to collect and aggregate data from clinical, genomic and other domains, both for single institution and collaborative projects.

All the available presentation slides can be downloaded here, please note that the presentation slides are released under an  Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) license. 


15th September - Thursday
14:30 - 14:40 Welcome  
14:40 - 15:20 Keynote Presentation 1
i2b2: The State of Art and Some Directions for the Future
Shawn Murphy
Massachusetts General Hospital, Boston - US
15:20 - 15:40 Bring the Analysis to the Data: Use Cases from Intensive Care to Inflammatory Disease Research Ulrich Sax
University Medical Center Göttingen - Germany
15:40 - 15:55 The use of standards to enforce the re-use of clinical data Mauro Giacomini 
University of Genoa, Genoa - Italy
15:55 - 16:20 Coffee Break and Poster Session  
16:20 - 16:40 i2b2 - Postgresql and R : Achievements and Perspectives (at APHP?) Nicolas Paris
INSERM - APHP, Paris - France
16:40 - 16:55

Design and Deployment of an i2b2 plugin for privacy-preserving exploration of genetic cohorts

Jean Louis Raisaro
EPFL, Lausanne - Switzerland
16:55 - 17:10

Next Generation Genomic and Clinical Data Management and Computing

Marco Masseroli
Politecnico di Milano, Milan - Italy
17:10 - 17:30 Determining the Feasibility of Proposed Targeted Therapy Oncology Clinical Trials using an i2b2-based Network Application Jack london
Thomas Jefferson University, Philadelphia - US
20:00 -           Social Dinner  

16th September - Friday
09:00 - 09:20 i2b2 as an Infrastructure for Supporting Precision Medicine: State of Art and Future Challenges Riccardo Bellazzi 
University of Pavia - Italy
09:20 - 09:40 Networking Data - Improving Healthcare: A Ten Year Medical Informatics Funding Program in Germany Hans-Ulrich Prokosch
Friedrich-Alexander-University Erlangen-Nuremberg - Germany
09:40 - 10:00 i2b2 and Cafe Variome: Current and Future Plans for Data Management and Discovery in Leicester Richard Bramley
University of Leicester - UK
10:00 - 10:35 Sponsor Presentation
Trinetx: A Public/Private Network for Accelerating Clinical Trials
TriNetX, Inc. - US
10:35 - 11:00 Coffee Break and Poster Session  
11:00 - 11:20 Mining medical data through approximate temporal functional dependencies Carlo Combi
University of Verona - Italy
11:20 - 11:35 A CDISC ODM centered ETL Suite for clinical routine and trial data – particular focus on i2b2 import process Frank Meineke
Leipzig University - Germany
11:35 - 11:50 i2b2: integration with REDCap and multi-project management  Mauro Bucalo
University of Pavia - BIOMERIS, Pavia - Italy
11:50 - 12:30  Keynote Presentation 2
Merging of i2b2 and tranSMART
Paul Avillach
Harvard Medical School, Boston - US

 

Venue and accomodation

The meeting was held in the Aula Bianca of COLLEGIO BORROMEO.

Organizing Commitee

  • Riccardo Bellazzi - CHT - University of Pavia – Fond. IRCCS Maugeri 
  • Lucia Sacchi - CHT - University of Pavia 
  • Federico Dagostin - CHT - University of Pavia

 

Conference sponsors

CHT - University of Pavia

TriNetX

BIOMERIS